Antigen

Antigen Class

TFs and others

Antigen

Tbx21

Cell type

Cell type Class

Blood

Cell type

Th1 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Sample

source_name

Th1 cells

antibody

T-bet (Lab produced (Szabo et al., Nature 2000))

cell type

Th1

cell number

100000000

genotype

wild type

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

30460034

Reads aligned (%)

65.1

Duplicates removed (%)

24.2

Number of peaks

12983 (qval < 1E-05)

mm9

Number of total reads

30460034

Reads aligned (%)

65.0

Duplicates removed (%)

24.4

Number of peaks

12979 (qval < 1E-05)